CDS

Accession Number TCMCG016C26210
gbkey CDS
Protein Id OMO54583.1
Location complement(join(35936..36001,36409..36514,37335..37403,37509..37576,37655..37727,37812..37898,38199..38269,39096..39171,39273..39403,39746..39829,39916..39975,40094..40270))
Organism Corchorus capsularis
locus_tag CCACVL1_27735

Protein

Length 355aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01014930.1
Definition Leucine-rich repeat, cysteine-containing subtype [Corchorus capsularis]
Locus_tag CCACVL1_27735

EGGNOG-MAPPER Annotation

COG_category E
Description F-Box protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01002        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K10268        [VIEW IN KEGG]
ko:K13051        [VIEW IN KEGG]
EC 3.4.19.5        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCGGGAGAAGAGAAGATGGAAGCAGAAGAAGAGACATGGATTTGGAACAAAGAAACAGTGCCCAAAGTGATGAAAATAGTCAGCACGAGACTTTCTCAAAGAGACCTCATCTCTCTCCTTCTTGTCAGCCCTTCGCTTCACCGAACTCTCCTTTCCTACCCTTCTCTTTGGCTTGCTATTGATTTGCGTGAGATGAATAATGCTGGGGATCGACTTGTATCTGCTCTTTCACTGCCAAGATATCAACATGTGAGGCAAATAAGTCTTGAATTTGCACAAGATATAGACGATGGTCATCTCGAAATCCTTAAGAGCAAGTGTTCGGATTCACTTCAAGGTCTTGAGTCTTTAAATCTGAATGGCTGCCAAAAGATAACTGACAAAGGAATTGAAGCTATAACCAGTTGTTGTCCCAAATTAAAGGTTTTCTCTATCTATTGGAATGTTAGGGCAACTGATATAGGTATCAAGCACCTGGTGAAGAACTGCAAGTATATAGTTGATTTGAACTTAAGTGGCTGTAAGAATTTATCAGACAAAAGTTTGCAATTAGTTGCTGACAATTACACAGACTTGGAGTCATTGAATATCACTAGGTGTGTCAAGATTACAGACAGTGGCTTGCAACAAATATTGATCAAGTGCTCCTGTCTCCAAAGTTTAAATCTTTATGCACTTTCCAGCTTCACAGATGAAGCTTACAAGAAGATATCTCTTCTATCTCATTTAAGATCCCTTGACTTGTGTGGTGCCCAGAATCTCTCAGATGAAGGACTTTTCTCTATAGCCAAATGCAAGAATCTTATATCTCTCAATCTAACATGGTGTGTACGTGTCACTGATGTGGGGGTCATAGCAATTGCTGAAAGTTGCACTTCTCTTGAATTTCTCAGTTTGTTTGGGATAGTTGGGGTAACTGACAAGTGCCTCGAGGCTCTTTCCAAGTTTTGTTCGAATACAATCACAACTCTTGATGTTAATGGATGTATCGGTATTAAGAAACGAAGCCGTGAAGATTTACTTCAGTTGTTCCCTCATCTGAGATGCTTCAAAGTGCATAGCTAA
Protein:  
MSGEEKMEAEEETWIWNKETVPKVMKIVSTRLSQRDLISLLLVSPSLHRTLLSYPSLWLAIDLREMNNAGDRLVSALSLPRYQHVRQISLEFAQDIDDGHLEILKSKCSDSLQGLESLNLNGCQKITDKGIEAITSCCPKLKVFSIYWNVRATDIGIKHLVKNCKYIVDLNLSGCKNLSDKSLQLVADNYTDLESLNITRCVKITDSGLQQILIKCSCLQSLNLYALSSFTDEAYKKISLLSHLRSLDLCGAQNLSDEGLFSIAKCKNLISLNLTWCVRVTDVGVIAIAESCTSLEFLSLFGIVGVTDKCLEALSKFCSNTITTLDVNGCIGIKKRSREDLLQLFPHLRCFKVHS